Posterior Results of Yassour2009: Posterior Results of Yassour 2009 Yeast Experiment Dataset
Description
Output summarized from MCMC posterior results
analyzing Yassour 2009 data.
Usage
yassour.PM.fits yassour.PM.appr yassour.info
Format
These are list
's containing several posterior means:
E.Phi
for expected expression, b.InitList.roc
for parameters,
AA.prob
for proportion of amino acids, sigmaW
for
standard error of measure errors, and gene.length
for
gene length.Details
yassour.PM.fits
and yassour.PM.appr
are the MCMC output
of with/without observed expression, respectively.
Both contain posterior means of expected expressions and coefficient
parameters: E.Phi
and b.InitList.roc
are
scaled results such that each MCMC iteration has mean 1 at E.Phi
. yassour.info
contains sequences information (Yeast):
AA.prob
and gene.length
are summarized
from corresponding genes in the analysis.
Note that some of genes may not have good quality of expression or sequence
information, so those genes are dropped from yassour
dataset.
Examples
Run this code## Not run:
# str(yassour.PM.fits)
# str(yassour.PM.appr)
# str(yassour.PM.info)
# ## End(Not run)
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